Package: transplantr 0.2.0
transplantr: Audit and Research Functions for Transplantation
A set of vectorised functions to calculate medical equations used in transplantation, focused mainly on transplantation of abdominal organs. These functions include donor and recipient risk indices as used by NHS Blood & Transplant, OPTN/UNOS and Eurotransplant, tools for quantifying HLA mismatches, functions for calculating estimated glomerular filtration rate (eGFR), a function to calculate the APRI (AST to platelet ratio) score used in initial screening of suitability to receive a transplant from a hepatitis C seropositive donor and some biochemical unit converter functions. All functions are designed to work with either US or international units. References for the equations are provided in the vignettes and function documentation.
Authors:
transplantr_0.2.0.tar.gz
transplantr_0.2.0.zip(r-4.5)transplantr_0.2.0.zip(r-4.4)transplantr_0.2.0.zip(r-4.3)
transplantr_0.2.0.tgz(r-4.4-any)transplantr_0.2.0.tgz(r-4.3-any)
transplantr_0.2.0.tar.gz(r-4.5-noble)transplantr_0.2.0.tar.gz(r-4.4-noble)
transplantr_0.2.0.tgz(r-4.4-emscripten)transplantr_0.2.0.tgz(r-4.3-emscripten)
transplantr.pdf |transplantr.html✨
transplantr/json (API)
NEWS
# Install 'transplantr' in R: |
install.packages('transplantr', repos = c('https://johnasher.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/johnasher/transplantr/issues
- kidney.donors - Simulated dataset of donors to illustrate KDRI vignette.
- liver.pts - Simulated dataset to illustrate MELD calculator vignette.
- mismatches - Simulated dataset to illustrate mismatches for HLA vignette.
- results - Simulated dataset to illustrate eGFR calculator vignette.
- results_US - Simulated dataset to illustrate eGFR calculator vignette.
- serial.results - Simulated dataset to illustrate serial results eGFR calculator vignette.
Last updated 5 years agofrom:9662038338. Checks:OK: 7. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 15 2024 |
R-4.5-win | OK | Oct 15 2024 |
R-4.5-linux | OK | Oct 15 2024 |
R-4.4-win | OK | Oct 15 2024 |
R-4.4-mac | OK | Oct 15 2024 |
R-4.3-win | OK | Oct 15 2024 |
R-4.3-mac | OK | Oct 15 2024 |
Exports:apribar_scorebilirubin_to_SIbilirubin_to_USbun_to_ureachi2dobckd_epickd_epi_UScockcroftcockcroft_UScreatinine_to_SIcreatinine_to_USeptsepts_lookupet_drihla_mm_levelhla_mm_level_stribwkdpikdpi_lookupkdpi_USliver_drimdrdmdrd_USmeldmeld_nameld_na_USmeld_USnankivellnankivell_spknankivell_spk_USnankivell_USp_passp_softp_soft_USpdripedi_softpeldpeld_USraw_eptsschwartzschwartz_USsoftsoft_USsoft2soft2_USukeldukeld_USukkdriukkdri_qukkrriukkrri_qurea_to_bunuskdriuskdri_USwalserwalser_USwatson_ukkdri
Dependencies:
Estimated GFR
Rendered fromegfr.Rmd
usingknitr::rmarkdown
on Oct 15 2024.Last update: 2020-02-28
Started: 2019-12-10
HLA Mismatch Level
Rendered fromhla_mismatch_grade.Rmd
usingknitr::rmarkdown
on Oct 15 2024.Last update: 2019-12-28
Started: 2019-12-16
Kidney Donor and Recipient Risk Index
Rendered fromkidney_risk_scores.Rmd
usingknitr::rmarkdown
on Oct 15 2024.Last update: 2020-01-06
Started: 2019-12-04
Liver transplant risk stratification
Rendered fromliver_recipient_scoring.Rmd
usingknitr::rmarkdown
on Oct 15 2024.Last update: 2020-02-27
Started: 2019-12-10